Scalpel 0.5.4-GCCcore-8.3.0

Scalpel is a software package for detecting INDELs (INsertions and DELetions) mutations in a reference genome which has been sequenced with next-generation sequencing technology (e.g., Illumina).

Accessing Scalpel 0.5.4-GCCcore-8.3.0

To load the module for Scalpel 0.5.4-GCCcore-8.3.0 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load Scalpel/0.5.4-GCCcore-8.3.0

BEAR Apps Version

2021a

More Information

For more information visit the Scalpel website.

Dependencies

This version of Scalpel has a direct dependency on: GCCcore/8.3.0 Perl/5.30.0-GCCcore-8.3.0

Last modified on 5th March 2020