BEAR Applications

biom-format 2.1.8-foss-2019b-Python-3.7.4

There is a newer version of biom-format

The BIOM file format (canonically pronounced biome) is designed to be a general-use format for representing biological sample by observation contingency tables. BIOM is a recognized standard for the Earth Microbiome Project and is a Genomics Standards Consortium supported project.

Accessing biom-format 2.1.8-foss-2019b-Python-3.7.4

To load the module for biom-format 2.1.8-foss-2019b-Python-3.7.4 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load biom-format/2.1.8-foss-2019b-Python-3.7.4

BEAR Apps Version

2021a

More Information

For more information visit the biom-format website.

Dependencies

This version of biom-format has a direct dependency on: foss/2019b h5py/2.10.0-foss-2019b-Python-3.7.4 Python/3.7.4-GCCcore-8.3.0 SciPy-bundle/2019.10-foss-2019b-Python-3.7.4

Required By

This version of biom-format is a direct dependent of: LEfSe/1.1-foss-2019b-Python-3.7.4

Other Versions

These versions of biom-format are available on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 25th September 2020