gcta 1.93.2-foss-2019b

GCTA (Genome-wide Complex Trait Analysis) was originally designed to estimate the proportion of phenotypic variance explained by genome- or chromosome-wide SNPs for complex traits (the GREML method), and has subsequently extended for many other analyses to better understand the genetic architecture of complex traits.

Accessing gcta 1.93.2-foss-2019b

To load the module for gcta 1.93.2-foss-2019b please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load gcta/1.93.2-foss-2019b

BEAR Apps Version

2021a

More Information

For more information visit the gcta website.

Dependencies

This version of gcta has a direct dependency on: Boost/1.71.0-gompi-2019b Eigen/3.3.7 foss/2019b imkl/2019.5.281-gompi-2019b Spectra/0.9.0 SQLite/3.29.0-GCCcore-8.3.0 zlib/1.2.11-GCCcore-8.3.0 zstd/1.4.4-GCCcore-8.3.0

Last modified on 3rd July 2020