pytabix 0.1-foss-2019b-Python-2.7.16

This module allows fast random access to files compressed with bgzip and indexed by tabix. It includes a C extension with code from klib. The bgzip and tabix programs are available here.

Accessing pytabix 0.1-foss-2019b-Python-2.7.16

To load the module for pytabix 0.1-foss-2019b-Python-2.7.16 please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):

module load pytabix/0.1-foss-2019b-Python-2.7.16

BEAR Apps Version

2021a

Extensions

  • pytabix 0.1

More Information

For more information visit the pytabix website.

Dependencies

This version of pytabix has a direct dependency on: foss/2019b Python/2.7.16-GCCcore-8.3.0

Last modified on 13th March 2020