BEAR Applications

seqtk 1.3-GCC-8.3.0

There is a newer version of seqtk

Seqtk is a fast and lightweight tool for processing sequences in the FASTA or FASTQ format. It seamlessly parses both FASTA and FASTQ files which can also be optionally compressed by gzip.

Accessing seqtk 1.3-GCC-8.3.0

To load the module for seqtk 1.3-GCC-8.3.0 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load seqtk/1.3-GCC-8.3.0

BEAR Apps Version

2021a

More Information

For more information visit the seqtk website.

Dependencies

This version of seqtk has a direct dependency on: GCC/8.3.0 zlib/1.2.11-GCCcore-8.3.0

Required By

This version of seqtk is a direct dependent of: shovill/1.1.0-foss-2019b-Python-3.7.4 snippy/4.6.0-foss-2019b-Perl-5.30.0

Other Versions

These versions of seqtk are available on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 10th November 2020