variant_tools 3.1.3-foss-2019b-Python-3.7.4

Variant tools is a software tool for the manipulation, annotation, selection, simulation, and analysis of variants in the context of next-gen sequencing analysis. Unlike some other tools used for Next-Gen sequencing analysis, variant tools is project based and provides a whole set of tools to manipulate and analyze genetic variants.

Accessing variant_tools 3.1.3-foss-2019b-Python-3.7.4

To load the module for variant_tools 3.1.3-foss-2019b-Python-3.7.4 please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):

module load variant_tools/3.1.3-foss-2019b-Python-3.7.4

BEAR Apps Version

2021a

More Information

For more information visit the variant_tools website.

Dependencies

This version of variant_tools has a direct dependency on: Boost/1.71.0-gompi-2019b foss/2019b GSL/2.6-GCC-8.3.0 HDF5/1.10.5-gompi-2019b PycURL/7.43.0.5-GCCcore-8.3.0-Python-3.7.4 PyTables/3.6.1-foss-2019b-Python-3.7.4 Python/3.7.4-GCCcore-8.3.0 PyZMQ/18.1.1-foss-2019b-Python-3.7.4 SciPy-bundle/2019.10-foss-2019b-Python-3.7.4

Last modified on 1st September 2020