vcf2maf 1.6.18-foss-2019b-Perl-5.30.0

Convert a VCF into a MAF, where each variant is annotated to only one of all possible gene isoforms.

Accessing vcf2maf 1.6.18-foss-2019b-Perl-5.30.0

To load the module for vcf2maf 1.6.18-foss-2019b-Perl-5.30.0 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load vcf2maf/1.6.18-foss-2019b-Perl-5.30.0

BEAR Apps Version

2021a

More Information

For more information visit the vcf2maf website.

Dependencies

This version of vcf2maf has a direct dependency on: foss/2019b Perl/5.30.0-GCCcore-8.3.0 SAMtools/1.10-GCC-8.3.0 VEP/99.2-foss-2019b-Perl-5.30.0

Last modified on 5th October 2020