Bowtie2 2.4.4-GCC-11.2.0

There is a newer version of Bowtie2

Bowtie 2 is an ultrafast and memory-efficient tool for aligning sequencing reads to long reference sequences.

Accessing Bowtie2 2.4.4-GCC-11.2.0

To load the module for Bowtie2 2.4.4-GCC-11.2.0 please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):

module load bear-apps/2021b
module load Bowtie2/2.4.4-GCC-11.2.0

BEAR Apps Version

2021b

Architectures

EL8-cascadelakeEL8-icelake

The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

More Information

For more information visit the Bowtie2 website.

Dependencies

This version of Bowtie2 has a direct dependency on: GCC/11.2.0 Perl/5.34.0-GCCcore-11.2.0 Python/3.9.6-GCCcore-11.2.0 zlib/1.2.11-GCCcore-11.2.0

Required By

This version of Bowtie2 is a direct dependent of: Bismark/0.24.2-foss-2021b

Other Versions

These versions of Bowtie2 are available on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 21st November 2023