PhitestR 0.2.0-foss-2021b-R-4.2.0

A bioinformatics method developed for analyzing the heterogeneity of single-cell populations. Phitest provides an objective and automatic method to evaluate the performance of clustering and quality of cell clusters.

Accessing PhitestR 0.2.0-foss-2021b-R-4.2.0

To load the module for PhitestR 0.2.0-foss-2021b-R-4.2.0 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load bear-apps/2021b
module load PhitestR/0.2.0-foss-2021b-R-4.2.0

BEAR Apps Version

2021b

Architectures

EL8-cascadelake — EL8-haswell — EL8-icelake

The listed architectures consist of two part: OS-CPU.

  • BlueBEAR: The OS used on BlueBEAR is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.
  • BEAR and CaStLeS Cloud VMs: These VMs can have one of two OSes. Those with access to a BEAR Cloud or CaStLeS VM should check that the listed architectures for an application include the OS of VM being used. The VMs, irrespective of OS, will use the haswell CPU type.

Extensions

  • PhitestR 0.2.0

More Information

For more information visit the PhitestR website.

Dependencies

This version of PhitestR has a direct dependency on: foss/2021b R/4.2.0-foss-2021b

Last modified on 26th August 2022