BLAT 3.7-GCC-11.3.0

There is a newer install of BLAT

BLAT on DNA is designed to quickly find sequences of 95% and greater similarity of length 25 bases or more.

Accessing BLAT 3.7-GCC-11.3.0

To load the module for BLAT 3.7-GCC-11.3.0 please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load bear-apps/2022a
module load BLAT/3.7-GCC-11.3.0

BEAR Apps Version

2022a

Architectures

EL8-sapphirerapids

The listed architectures consist of two parts: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

More Information

For more information visit the BLAT website.

Dependencies

This version of BLAT has a direct dependency on: freetype/2.12.1-GCCcore-11.3.0 GCC/11.3.0 libiconv/1.17-GCCcore-11.3.0 libpng/1.6.37-GCCcore-11.3.0 MariaDB/10.9.3-GCC-11.3.0 OpenSSL/1.1 util-linux/2.38-GCCcore-11.3.0 zlib/1.2.12-GCCcore-11.3.0

Required By

This version of BLAT is a direct dependent of: funannotate/1.8.17-foss-2022a Trinity/2.15.1-foss-2022a

Other Versions

These versions of BLAT are available on the BEAR systems (BlueBEAR and BEAR Cloud VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 12th August 2024