BEAR Applications

prokka 1.14.5-gompi-2021b

Prokka is a software tool for the rapid annotation of prokaryotic genomes.

Accessing prokka 1.14.5-gompi-2021b

To load the module for prokka 1.14.5-gompi-2021b please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):

module load bear-apps/2022a
module load prokka/1.14.5-gompi-2021b

BEAR Apps Version

2022a

More Information

For more information visit the prokka website.

Dependencies

This version of prokka has a direct dependency on: BioPerl/1.7.8-GCCcore-11.2.0 Bio-SearchIO-hmmer/1.7.3-GCC-11.2.0 BLAST+/2.12.0-gompi-2021b gompi/2021b Java/11 libidn/1.38-GCCcore-11.2.0 parallel/20210722-GCCcore-11.2.0

Required By

This version of prokka is a direct dependent of: panaroo/1.3.2-foss-2021b

Other Versions

These versions of prokka are available on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 10th February 2023