HGT-ID 1.0-foss-2018b-Java-1.8-Perl-5.28.0-R-3.5.1

Deprecated: Use of this version of HGT-ID is deprecated. More information on our Applications Support and Retention Policy.

HGT-ID v1.0: An efficient and sensitive program for detecting viral insertion sequences in the genome of human cancers

Accessing HGT-ID 1.0-foss-2018b-Java-1.8-Perl-5.28.0-R-3.5.1

To load the module for HGT-ID 1.0-foss-2018b-Java-1.8-Perl-5.28.0-R-3.5.1 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load HGT-ID/1.0-foss-2018b-Java-1.8-Perl-5.28.0-R-3.5.1

BEAR Apps Version




The listed architectures consist of two part: OS-CPU.

  • BlueBEAR: The OS used on BlueBEAR is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.
  • BEAR and CaStLeS Cloud VMs: These VMs can have one of two OSes. Those with access to a BEAR Cloud or CaStLeS VM should check that the listed architectures for an application include the OS of VM being used. The VMs, irrespective of OS, will use the haswell CPU type.

More Information

For more information visit the HGT-ID website.


This version of HGT-ID has a direct dependency on: foss/2018b Java/1.8 Perl/5.28.0-GCCcore-7.3.0 R/3.5.1-foss-2018b wget/1.20.1-GCCcore-7.3.0

Last modified on 4th June 2019