chiron 0.4.2-foss-2018b-Python-3.6.6

Deprecated: Use of this version of chiron is deprecated. More information on our Applications Support and Retention Policy.

A basecaller for Oxford Nanopore Technologies' sequencers

Accessing chiron 0.4.2-foss-2018b-Python-3.6.6

To load the module for chiron 0.4.2-foss-2018b-Python-3.6.6 please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load chiron/0.4.2-foss-2018b-Python-3.6.6

BEAR Apps Version

2018b

Architectures

EL8-cascadelake — EL8-icelake — EL8-sapphirerapids

The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

Extensions

• chiron 0.4.2
• statsmodels 0.9.0
• tqdm 4.28.1

More Information

For more information visit the chiron website.

Dependencies

This version of chiron has a direct dependency on: foss/2018b h5py/2.8.0-foss-2018b-Python-3.6.6 mappy/2.15-foss-2018b-Python-3.6.6 Python/3.6.6-foss-2018b TensorFlow/1.10.1-foss-2018b-Python-3.6.6

Last modified on 3rd June 2019