itsadug 2.3-foss-2018b-R-3.5.1

Deprecated: Use of this version of itsadug is deprecated. More information on our Applications Support and Retention Policy.

GAMM (Generalized Additive Mixed Modeling; Lin & Zhang, 1999) as implemented in the R package 'mgcv' (Wood, S.N., 2006; 2011) is a nonlinear regression analysis which is particularly useful for time course data such as EEG, pupil dilation, gaze data (eye tracking), and articulography recordings, but also for behavioral data such as reaction times and response data. As time course measures are sensitive to autocorrelation problems, GAMMs implements methods to reduce the autocorrelation problems. This package includes functions for the evaluation of GAMM models (e.g., model comparisons, determining regions of significance, inspection of autocorrelational structure in residuals) and interpreting of GAMMs (e.g., visualization of complex interactions, and contrasts).

Accessing itsadug 2.3-foss-2018b-R-3.5.1

To load the module for itsadug 2.3-foss-2018b-R-3.5.1 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load itsadug/2.3-foss-2018b-R-3.5.1

BEAR Apps Version




The listed architectures consist of two part: OS-CPU.

  • BlueBEAR: The OS used on BlueBEAR is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.
  • BEAR and CaStLeS Cloud VMs: These VMs can have one of two OSes. Those with access to a BEAR Cloud or CaStLeS VM should check that the listed architectures for an application include the OS of VM being used. The VMs, irrespective of OS, will use the haswell CPU type.


  • itsadug 2.3
  • plotfunctions 1.3

More Information

For more information visit the itsadug website.


This version of itsadug has a direct dependency on: foss/2018b R/3.5.1-foss-2018b

Last modified on 4th June 2019