KneadData 0.7.6-foss-2019b-Python-3.7.4-Java-11

KneadData is a tool designed to perform quality control on metagenomic and metatranscriptomic sequencing data, especially data from microbiome experiments.

Accessing KneadData 0.7.6-foss-2019b-Python-3.7.4-Java-11

To load the module for KneadData 0.7.6-foss-2019b-Python-3.7.4-Java-11 please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load KneadData/0.7.6-foss-2019b-Python-3.7.4-Java-11

BEAR Apps Version

2019b

Architectures

EL8-cascadelake — EL8-icelake — EL8-sapphirerapids

The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

Extensions

• kneaddata 0.7.6

More Information

For more information visit the KneadData website.

Dependencies

This version of KneadData has a direct dependency on: Bowtie2/2.3.5.1-GCC-8.3.0 FastQC/0.11.9-Java-11 foss/2019b Java/11 Python/3.7.4-GCCcore-8.3.0 SAMtools/1.10-GCC-8.3.0 Trimmomatic/0.39-Java-11

Last modified on 10th June 2020