samblaster 0.1.26-GCCcore-8.3.0

samblaster: a tool to mark duplicates and extract discordant and split reads from sam files

Accessing samblaster 0.1.26-GCCcore-8.3.0

To load the module for samblaster 0.1.26-GCCcore-8.3.0 please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):

module load samblaster/0.1.26-GCCcore-8.3.0

BEAR Apps Version




The listed architectures consist of two part: OS-CPU.

  • BlueBEAR: The OS used on BlueBEAR is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.
  • BEAR Cloud and CaStLeS VMs: These VMs can have one of two OSes. Those with access to a BEAR Cloud or CaStLeS VM should check that the listed architectures for an application include the OS of VM being used. The VMs, irrespective of OS, will use the haswell CPU type.

More Information

For more information visit the samblaster website.


This version of samblaster has a direct dependency on: GCCcore/8.3.0

Last modified on 30th September 2020