BEAR Applications

MCL 14.137-GCCcore-9.3.0

There is a newer version of MCL

The MCL algorithm is short for the Markov Cluster Algorithm, a fast and scalable unsupervised cluster algorithm for graphs (also known as networks) based on simulation of (stochastic) flow in graphs.

Accessing MCL 14.137-GCCcore-9.3.0

To load the module for MCL 14.137-GCCcore-9.3.0 please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):

module load MCL/14.137-GCCcore-9.3.0

BEAR Apps Version

2020a

Architectures

EL8-cascadelake — EL8-haswell — Ubuntu20.04-haswell

The listed architectures consist of two part: OS-CPU.

• BlueBEAR: The OS used on BlueBEAR is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.
• BEAR Cloud and CaStLeS VMs: These VMs can have one of two OSes. Those with access to a BEAR Cloud or CaStLeS VM should check that the listed architectures for an application include the OS of VM being used. The VMs, irrespective of OS, will use the haswell CPU type.

More Information

For more information visit the MCL website.

Dependencies

This version of MCL has a direct dependency on: GCCcore/9.3.0 Perl/5.30.2-GCCcore-9.3.0

Required By

This version of MCL is a direct dependent of: Roary/3.13.0-foss-2020a

Other Versions

These versions of MCL are available on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 10th November 2020