hostile 2.0.0-foss-2023a

Precise host read removal. Friendly to microbes, hostile towards host.

Accessing hostile 2.0.0-foss-2023a

To load the module for hostile 2.0.0-foss-2023a please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load bear-apps/2023a
module load hostile/2.0.0-foss-2023a

BEAR Apps Version

2023a

Architectures

EL8-cascadelake — EL8-icelake — EL8-sapphirerapids

The listed architectures consist of two parts: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

Extensions

• anyio 4.8.0
• defopt 6.4.0
• dnaio 1.2.3
• h11 0.14.0
• hostile 2.0.0
• httpcore 1.0.7
• httpx 0.28.1
• pockets 0.9.1
• sniffio 1.3.1
• sphinxcontrib-napoleon-0.7
• versioningit 3.1.2
• xopen 2.0.2
• zlib_ng 0.5.1

More Information

For more information visit the hostile website.

Dependencies

This version of hostile has a direct dependency on: BEDTools/2.31.1-GCC-12.3.0 Bowtie2/2.5.4-GCC-12.3.0 foss/2023a gawk/5.3.1-GCC-12.3.0 minimap2/2.28-GCCcore-12.3.0 Python/3.11.3-GCCcore-12.3.0 Python-bundle-PyPI/2023.06-GCCcore-12.3.0 python-isal/1.6.1-GCCcore-12.3.0 SAMtools/1.21-GCC-12.3.0 tqdm/4.66.1-GCCcore-12.3.0

Last modified on 6th February 2025