modbamtools 0.4.8-gfbf-2023a

A set of tools to manipulate and visualize data from base modification bam files

Accessing modbamtools 0.4.8-gfbf-2023a

To load the module for modbamtools 0.4.8-gfbf-2023a please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load bear-apps/2023a
module load modbamtools/0.4.8-gfbf-2023a

BEAR Apps Version

2023a

Architectures

EL8-cascadelake — EL8-icelake — EL8-sapphirerapids

The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

Extensions

• click 8.1.3
• modbamtools 0.4.8
• PyPDF2 3.0.1

More Information

For more information visit the modbamtools website.

Dependencies

This version of modbamtools has a direct dependency on: gfbf/2023a HDBSCAN/0.8.39-gfbf-2023a Kaleido/0.2.1-GCCcore-12.3.0 modbam2bed/0.5.3-gfbf-2023a Pillow-SIMD/9.5.0-GCCcore-12.3.0 plotly.py/5.16.0-GCCcore-12.3.0 pyBigWig/0.3.22-gfbf-2023a Pysam/0.22.0-GCC-12.3.0 Python/3.11.3-GCCcore-12.3.0 SciPy-bundle/2023.07-gfbf-2023a tqdm/4.66.1-GCCcore-12.3.0

Last modified on 8th November 2024