relion-blush 0.0.1.20240529.7889199-foss-2023a-CUDA-12.1.1
This repository contains code for running Blush regularization in RELION-5. This project is designed to work in conjunction with tools for cryo-electron microscopy (cryo-EM) three-dimensional reconstruction. For specific functionalities, we leverage the capabilities of RELION, an open-source, highly flexible and high-performance solution for cryo-EM. Estimating dynamics from cryo-EM images and use them to improve your map (maybe)Accessing relion-blush 0.0.1.20240529.7889199-foss-2023a-CUDA-12.1.1
To load the module for relion-blush 0.0.1.20240529.7889199-foss-2023a-CUDA-12.1.1 please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):
📋
module load bear-apps/2023a
module load relion-blush/0.0.1.20240529.7889199-foss-2023a-CUDA-12.1.1
BEAR Apps Version
Architectures
EL8-icelake (GPUs: NVIDIA A100, NVIDIA A30)
The listed architectures consist of two parts: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.
Extensions
- loguru 0.7.0
- relion_blush 0.0.1.20240529
More Information
For more information visit the relion-blush website.
Dependencies
This version of relion-blush has a direct dependency on: CUDA/12.1.1 foss/2023a mrcfile/1.5.0-foss-2023a Python/3.11.3-GCCcore-12.3.0 PyTorch/2.1.2-foss-2023a-CUDA-12.1.1 relion-blush_data/1.0 torchvision/0.16.0-foss-2023a-CUDA-12.1.1
Required By
This version of relion-blush is a direct dependent of: RELION/5.0.0-foss-2023a-CUDA-12.1.1
Last modified on 3rd March 2025