xpclr 1.1.2-foss-2023a

Code to compute the XP-CLR statistic to infer natural selection. updated implementation as per Chen, Patterson & Reich 2010 https://www.ncbi.nlm.nih.gov/pubmed/20086244

Accessing xpclr 1.1.2-foss-2023a

To load the module for xpclr 1.1.2-foss-2023a please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load bear-apps/2023a
module load xpclr/1.1.2-foss-2023a

BEAR Apps Version

2023a

Architectures

EL8-cascadelake — EL8-icelake — EL8-sapphirerapids

The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

More Information

For more information visit the xpclr website.

Dependencies

This version of xpclr has a direct dependency on: foss/2023a Python/3.11.3-GCCcore-12.3.0 scikit_allel/1.3.11-foss-2023a

Last modified on 6th September 2024