Kaptive 3.1.0-foss-2024a
Kaptive is a tool for bacterial in silico serotyping. It takes one or more pre-assembled genomes and for each finds the best matching locus from a reference database.Accessing Kaptive 3.1.0-foss-2024a
To load the module for Kaptive 3.1.0-foss-2024a please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):
📋
module load bear-apps/2024a
module load Kaptive/3.1.0-foss-2024a
BEAR Apps Version
Architectures
EL8-emeraldrapids — EL8-icelake — EL8-sapphirerapids
The listed architectures consist of two parts: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.
Extensions
- dna-features-viewer-3.1.5
- Kaptive 3.1.0
More Information
For more information visit the Kaptive website.
Dependencies
This version of Kaptive has a direct dependency on: Biopython/1.84-gfbf-2024a foss/2024a matplotlib/3.9.2-gfbf-2024a Python/3.12.3-GCCcore-13.3.0 SciPy-bundle/2024.05-gfbf-2024a
Required By
This version of Kaptive is a direct dependent of: Kleborate/3.2.4-foss-2024a
Last modified on 5th June 2026