TRUST4 1.1.6.1-GCC-13.3.0

Tcr Receptor Utilities for Solid Tissue (TRUST) is a computational tool to analyze TCR and BCR sequences using unselected RNA sequencing data, profiled from solid tissues, including tumors. TRUST4 performs de novo assembly on V, J, C genes including the hypervariable complementarity-determining region 3 (CDR3) and reports consensus of BCR/TCR sequences. TRUST4 then realigns the contigs to IMGT reference gene sequences to report the corresponding information. TRUST4 supports both single-end and paired-end sequencing data with any read length.

Accessing TRUST4 1.1.6.1-GCC-13.3.0

To load the module for TRUST4 1.1.6.1-GCC-13.3.0 please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load bear-apps/2024a
module load TRUST4/1.1.6.1-GCC-13.3.0

BEAR Apps Version

2024a

Architectures

EL8-emeraldrapids — EL8-icelake — EL8-sapphirerapids

The listed architectures consist of two parts: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

More Information

For more information visit the TRUST4 website.

Dependencies

This version of TRUST4 has a direct dependency on: GCC/13.3.0 Perl/5.38.2-GCCcore-13.3.0 Python/3.12.3-GCCcore-13.3.0

Last modified on 14th August 2025