ThermoFisher-PyEDS 10.0.0-gfbf-2024a

The PyEDS is a Python library providing collection of utilities to conveniently access and display results from Thermo Discoverer software like Compound Discoverer or Proteome Discoverer. Although the data are stored in open format already (SQLite database), reading complex hierarchies is still not a trivial task and requires certain knowledge of internal mechanisms. Using PyEDS, all the hard work is done automatically, so you can focus more on your research instead of how to read the data. The PyEDS library provides several tools to read data (pyeds.EDS), displaying tables metadata (pyeds.Summary) as well as displaying actual data in nicely formatted tables (pyeds.Review). In addition, a set of utilities is now available to simplify custom scripting nodes (pyeds.scripting).

Accessing ThermoFisher-PyEDS 10.0.0-gfbf-2024a

To load the module for ThermoFisher-PyEDS 10.0.0-gfbf-2024a please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load bear-apps/2024a
module load ThermoFisher-PyEDS/10.0.0-gfbf-2024a

BEAR Apps Version

2024a

Architectures

EL8-emeraldrapids — EL8-icelake — EL8-sapphirerapids

The listed architectures consist of two parts: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

More Information

For more information visit the ThermoFisher-PyEDS website.

Dependencies

This version of ThermoFisher-PyEDS has a direct dependency on: gfbf/2024a Python/3.12.3-GCCcore-13.3.0 SciPy-bundle/2024.05-gfbf-2024a

Last modified on 16th December 2025