fastsimcoal 2.8-GCCcore-13.3.0

While preserving all the simulation flexibility of simcoal2, fastsimcoal is now implemented under a faster continous-time sequential Markovian coalescent approximation, allowing it to efficiently generate genetic diversity for different types of markers along large genomic regions, for both present or ancient samples

Accessing fastsimcoal 2.8-GCCcore-13.3.0

To load the module for fastsimcoal 2.8-GCCcore-13.3.0 please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load bear-apps/2024a
module load fastsimcoal/2.8-GCCcore-13.3.0

BEAR Apps Version

2024a

Architectures

EL8-emeraldrapids — EL8-icelake — EL8-sapphirerapids

The listed architectures consist of two parts: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

More Information

For more information visit the fastsimcoal website.

Dependencies

This version of fastsimcoal has a direct dependency on: GCCcore/13.3.0

Last modified on 3rd September 2025