nanoget 1.19.4-foss-2024a

Functions to extract information from Oxford Nanopore sequencing data and alignments

Accessing nanoget 1.19.4-foss-2024a

To load the module for nanoget 1.19.4-foss-2024a please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load bear-apps/2024a
module load nanoget/1.19.4-foss-2024a

BEAR Apps Version

2024a

Architectures

EL8-emeraldrapids — EL8-icelake — EL8-sapphirerapids

The listed architectures consist of two parts: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

More Information

For more information visit the nanoget website.

Dependencies

This version of nanoget has a direct dependency on: Biopython/1.84-gfbf-2024a foss/2024a nanomath/1.4.0-foss-2024a Pysam/0.22.1-GCC-13.3.0 Python/3.12.3-GCCcore-13.3.0 SciPy-bundle/2024.05-gfbf-2024a

Required By

This version of nanoget is a direct dependent of: NanoPlot/1.43.0-foss-2024a

Other Versions

These versions of nanoget are available on the BEAR systems (BlueBEAR and BEAR Cloud VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 15th May 2026