plotsr 20250407-foss-2024a

Plotsr generates high-quality visualisation of synteny and structural rearrangements between multiple genomes. For this, it uses the genomic structural annotations between multiple chromosome-level assemblies.

Accessing plotsr 20250407-foss-2024a

To load the module for plotsr 20250407-foss-2024a please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load bear-apps/2024a
module load plotsr/20250407-foss-2024a

BEAR Apps Version

2024a

Architectures

EL8-emeraldrapids — EL8-icelake — EL8-sapphirerapids

The listed architectures consist of two parts: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

More Information

For more information visit the plotsr website.

Dependencies

This version of plotsr has a direct dependency on: foss/2024a matplotlib/3.9.2-gfbf-2024a Python/3.12.3-GCCcore-13.3.0 SciPy-bundle/2024.05-gfbf-2024a

Last modified on 13th August 2025