NGenomeSyn

NGenomeSyn, an easy-to-use and flexible tool, for publication-quality visualization of syntenic relationships (user-defined or generated by our custom script) and genomic features (e.g. repeats, structural variations, genes) on tens of genomes with high customization. NGenomeSyn allows its user to adjust default options for genome and link styles defined in the configuration file and simply adjusts options of moving, scaling, and rotation of target genomes, yielding a rich layout and publication-ready figure. A state-to-the-art figure enables users and readers to quickly catch key points hidden in the large-amount data at a galance. Moreover, NGenomeSyn could be applied on the visualization of relationships among other data with a similar input format(similar to sankey diagram).

More Information

For more information visit the NGenomeSyn website.

Available Versions

These versions of NGenomeSyn are available on the BEAR systems (BlueBEAR and BEAR Cloud VMs). These will be retained in accordance with our Applications Support and Retention Policy.