OptiType
OptiType is a novel HLA genotyping algorithm based on integer linear programming, capable of producing accurate 4-digit HLA genotyping predictions from NGS data by simultaneously selecting all major and minor HLA Class I alleles.More Information
For more information visit the OptiType website.
Available Versions
These versions of OptiType are available on the BEAR systems (BlueBEAR and BEAR Cloud VMs). These will be retained in accordance with our Applications Support and Retention Policy.
| Version | BEAR Apps Version |
|---|---|
| 1.3.2-foss-2018b-Python-3.6.6 | 2018b |
| 1.3.2-foss-2018b-Python-2.7.15 | 2018b |