SBGNview

SBGNview greatly extends the Pathview project by supporting multiple major pathway databases beyond KEGG. Pathview has been widely used in omics studies and data analyses, and has become the leading tool in its category.It maps, integrates and visualizes a wide range of data onto KEGG pathway graphs. Key features: Pathway diagram and definition by the widely adopted SBGN standard formats; Supports multiple major pathway databases beyond KEGG (Reactome, MetaCyc, SMPDB, PANTHER, METACROP etc) and user defined pathways; Covers 5,200 reference pathways and over 3,000 species by default; Extensive graphics controls, including glyph and edge attributes, graph layout and sub-pathway highlight; SBGN pathway data manipulation, processing, extraction and analysis.

More Information

For more information visit the SBGNview website.

Available Versions

These versions of SBGNview are available on the BEAR systems (BlueBEAR and BEAR Cloud VMs). These will be retained in accordance with our Applications Support and Retention Policy.