This module allows fast random access to files compressed with bgzip and indexed by tabix. It includes a C extension with code from klib. The bgzip and tabix programs are available here.

More Information

For more information visit the pytabix website.

Available Versions

These versions of pytabix are available on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Version BEAR Apps Version
0.1-foss-2019b-Python-2.7.16 2019b