scoring-matrices

Dependency free, Cython-compatible scoring matrices to use with biological sequences. Scoring Matrices are matrices used to score the matches and mismatches between two characters are the same position in a sequence alignment. Some of these matrices are derived from substitution matrices, which uses evolutionary modeling.

More Information

For more information visit the scoring-matrices website.

Available Versions

These versions of scoring-matrices are available on the BEAR systems (BlueBEAR and BEAR Cloud VMs). These will be retained in accordance with our Applications Support and Retention Policy.