Scrappie 1.4.2-foss-2018b

Deprecated: Use of this version of Scrappie is deprecated. More information on our Applications Support and Retention Policy.

Scrappie is a technology demonstrator for the Oxford Nanopore Research Algorithms group.

Accessing Scrappie 1.4.2-foss-2018b

To load the module for Scrappie 1.4.2-foss-2018b please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):

module load Scrappie/1.4.2-foss-2018b

BEAR Apps Version

2018b

Architectures

EL8-cascadelake — EL8-haswell — Ubuntu20.04-haswell

The listed architectures consist of two part: OS-CPU.

  • BlueBEAR: The OS used on BlueBEAR is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.
  • BEAR Cloud and CaStLeS VMs: These VMs can have one of two OSes. Those with access to a BEAR Cloud or CaStLeS VM should check that the listed architectures for an application include the OS of VM being used. The VMs, irrespective of OS, will use the haswell CPU type.

More Information

For more information visit the Scrappie website.

Dependencies

This version of Scrappie has a direct dependency on: foss/2018b HDF5/1.10.2-foss-2018b

Other Versions

These versions of Scrappie are available on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Version BEAR Apps Version
1.4.1-foss-2019b-Python-2.7.16 2019b

Last modified on 1st July 2019