savvy 1.3.0-GCC-8.2.0-2.31.1

Interface to various variant calling formats.

Accessing savvy 1.3.0-GCC-8.2.0-2.31.1

To load the module for savvy 1.3.0-GCC-8.2.0-2.31.1 please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load savvy/1.3.0-GCC-8.2.0-2.31.1

BEAR Apps Version

2019a

Architectures

EL8-cascadelakeEL8-icelakeEL8-sapphirerapids

The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

More Information

For more information visit the savvy website.

Dependencies

This version of savvy has a direct dependency on: bzip2/1.0.6-GCCcore-8.2.0 cURL/7.63.0-GCCcore-8.2.0 GCC/8.2.0-2.31.1 HTSlib/1.9-GCC-8.2.0-2.31.1 shrinkwrap/1.0.0-beta-GCCcore-8.2.0 XZ/5.2.4-GCCcore-8.2.0 zstd/1.4.0-GCCcore-8.2.0

Required By

This version of savvy is a direct dependent of: SAIGE/0.35.8.8-foss-2019a-R-3.6.0

Last modified on 28th October 2019