Installed Applications: 2019a

Applications available on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs). In any one job, or session, you should use applications from only one BEAR Apps Version.

Application Version
AFNI 18.3.00-foss-2019a-Python-3.7.2
ALFA 1.1.1-foss-2019a-Python-3.7.2
Amber 18.15-AmberTools-19.8-fosscuda-2019a-Python-2.7.15
Amber 18.15-AmberTools-19.8-foss-2019a-Python-2.7.15
anno 1.0-foss-2019a
ANTLR 2.7.7-foss-2019a
ANTs 3d41647-foss-2019a-Python-3.7.2
APR 1.7.0-GCCcore-8.2.0
APR-util 1.6.1-GCCcore-8.2.0
ATK 2.32.0-GCCcore-8.2.0
at-spi2-atk 2.32.0-GCCcore-8.2.0
at-spi2-core 2.32.0-GCCcore-8.2.0
Autoconf 2.69-GCCcore-8.2.0
Automake 1.16.1-GCCcore-8.2.0
Autotools 20180311-GCCcore-8.2.0
BamTools 2.5.1-GCC-8.2.0-2.31.1
BamTools 2.5.1-foss-2019a
basemap 1.2.1-foss-2019a-Python-3.7.2
basemap 1.2.1-foss-2019a-Python-2.7.15
BaseSpaceSequenceHubCLI 1.0.0
BatVI 1.02-foss-2019a
Bazel 0.25.2-GCCcore-8.2.0
Bazel 0.20.0-GCCcore-8.2.0
BCFtools 1.9-foss-2019a
BEDTools 2.28.0-GCC-8.2.0-2.31.1
binutils 2.31.1-GCCcore-8.2.0
binutils 2.31.1
binutils 2.30
Bio-DB-BigFile 1.07-foss-2019a-Perl-5.28.1
Bio-DB-BigFile-jksrc v375-foss-2019a
Bio-DB-HTS 3.01-GCC-8.2.0-2.31.1-Perl-5.28.1
BioPerl 1.7.2-GCCcore-8.2.0-Perl-5.28.1
Biopython 1.73-fosscuda-2019a
Biopython 1.73-foss-2019a
Bison 3.0.5-GCCcore-8.2.0
Bison 3.0.5
Bison 3.0.4
BLAST+ 2.9.0-gompi-2019a
Blender 2.81-ef47c99fcb9e
Blosc 1.17.0-GCCcore-8.2.0
bokeh 1.3.4-fosscuda-2019a-Python-3.7.2
bokeh 1.3.4-foss-2019a-Python-3.7.2
Boost 1.70.0-gompic-2019a
Boost 1.70.0-gompi-2019a
Boost.Python 1.70.0-gompic-2019a
Boost.Python 1.70.0-gompi-2019a
Bullet 2.88-fosscuda-2019a-Python-3.7.2
Bullet 2.88-foss-2019a-Python-3.7.2
BWA 0.7.17-foss-2019a
bzip2 1.0.6-GCCcore-8.2.0
C3D 1.0.0
cairo 1.16.0-GCCcore-8.2.0
Cartopy 0.17.0-foss-2019a-Python-3.7.2
CASTEP 16.1-foss-2019a
CDO 1.9.8-foss-2019a
CellRanger 3.1.0
cftime 1.0.3.4-foss-2019a-Python-3.7.2
cftime 1.0.3.4-foss-2019a-Python-2.7.15
CGAL 4.14-foss-2019a-Python-2.7.15
Clairvoyante 1.02-fosscuda-2019a-Python-3.7.2
Clairvoyante 1.02-foss-2019a-Python-3.7.2
Clang 8.0.0-GCCcore-8.2.0
CMake 3.13.3-GCCcore-8.2.0
CODEX2 20191031-foss-2019a-R-3.6.0
ConnectomeWorkbench 1.3.2-GCCcore-8.2.0
conumee 1.18.0-foss-2019a-R-3.6.0
corner 2.0.1-foss-2019a-Python-3.7.2
corner 2.0.1-foss-2019a-Python-2.7.15
CppUnit 1.12.1-GCCcore-8.2.0
CSBDeep 0.4.1-fosscuda-2019a-Python-3.7.2
CSBDeep 0.4.1-foss-2019a-Python-3.7.2
ctffind 4.1.13-fosscuda-2019a
ctffind 4.1.13-foss-2019a
CUDA 8.0.61
CUDA 10.1.105-ppc64le
CUDA 10.1.105-GCC-8.2.0-2.31.1
CUDA 10.1.105
cuDNN 7.4.2.24-gcccuda-2019a-ppc64le
cuDNN 7.4.2.24-gcccuda-2019a
CUnit 2.1-3-GCCcore-8.2.0
cURL 7.63.0-GCCcore-8.2.0
Curves+ 2015-foss-2019a
cutadapt 2.6-foss-2019a-Python-3.7.2
dask 2.3.0-fosscuda-2019a-Python-3.7.2
dask 2.3.0-foss-2019a-Python-3.7.2
DB 18.1.32-GCCcore-8.2.0
DBD-mysql 4.050-foss-2019a-Perl-5.28.1
dbscan 1.1-5-foss-2019a-R-3.6.0
DBus 1.13.8-GCCcore-8.2.0
DeepMod 0.1.1-foss-2019a-Python-3.7.2
deSALT 1.5-foss-2019a
destiny 2.14.0-foss-2019a-R-3.6.0
dill 0.3.0-foss-2019a
DosageConvertor 6761a8b-foss-2019a
double-conversion 3.1.4-GCCcore-8.2.0
Doxygen 1.8.15-GCCcore-8.2.0
DPClust 2.2.8-foss-2019a-R-3.6.0
ecCodes 2.9.2-foss-2019a
Eigen 3.3.7
Eigen 3.3.4-foss-2019a
EIGENSOFT 7.2.1-foss-2019a
ELMoForManyLangs 0.0.2-fosscuda-2019a-Python-3.7.2
ELMoForManyLangs 0.0.2-foss-2019a-Python-3.7.2
emcee 2.2.1-foss-2019a
ESMF 8.0.0-foss-2019a
ESMPy 8.0.0-foss-2019a-Python-3.7.2
ESMPy 8.0.0-foss-2019a-Python-2.7.15
expat 2.2.6-GCCcore-8.2.0
FFmpeg 4.1.3-GCCcore-8.2.0
FFTW 3.3.8-gompic-2019a
FFTW 3.3.8-gompi-2019a
file 5.37-GCCcore-8.2.0
flappie 2.0.0-foss-2019a-Python-3.7.2
flex 2.6.4-GCCcore-8.2.0
flex 2.6.4
FLTK 1.3.5-GCC-8.2.0-2.31.1
Flye 2.6-foss-2019a-Python-3.7.2
FMRIprep 20.2.0-foss-2019a-Python-3.7.2
FMRIprep 20.0.6-foss-2019a-Python-3.7.2
FMRIprep 1.5.1-foss-2019a-Python-3.7.2
fontconfig 2.13.1-GCCcore-8.2.0-libpng-1.2.58
fontconfig 2.13.1-GCCcore-8.2.0
Forge 19.1.4
foss 2019a
fosscuda 2019a
freeglut 3.0.0-GCCcore-8.2.0
FreeSurfer 6.0.1-centos6_x86_64
freetype 2.9.1-GCCcore-8.2.0-libpng-1.2.58
freetype 2.9.1-GCCcore-8.2.0
FriBidi 1.0.5-GCCcore-8.2.0
FSL 5.0.11-foss-2019a-Python-3.7.2
FTGL 2.1.3-rc5-GCCcore-8.2.0
GATK 4.1.4.0-GCCcore-8.2.0-Java-1.8
gc 7.6.10-GCCcore-8.2.0
GCC 8.2.0-2.31.1
GCCcore 8.2.0
gcccuda 2019a
Gctf 1.06
GDAL 3.0.0-foss-2019a-Python-3.7.2
GDAL 3.0.0-foss-2019a-Python-2.7.15
GDB 8.3-foss-2019a-Python-2.7.15
Gdk-Pixbuf 2.38.1-GCCcore-8.2.0
gensim 3.8.1-fosscuda-2019a-Python-3.7.2
gensim 3.8.1-foss-2019a-Python-3.7.2
geopy 1.20.0-foss-2019a-Python-3.7.2
GEOS 3.7.2-foss-2019a-Python-3.7.2
GEOS 3.7.2-foss-2019a-Python-2.7.15
gettext 0.19.8.1-GCCcore-8.2.0
gettext 0.19.8.1
gflags 2.2.2-GCCcore-8.2.0
Ghostscript 9.27-GCCcore-8.2.0
giflib 5.1.4-GCCcore-8.2.0
git-lfs 2.9.1
GLib 2.60.1-GCCcore-8.2.0
glog 0.4.0-GCCcore-8.2.0
g_mmpbsa 1.6
GMP 6.1.2-GCCcore-8.2.0
gnuplot 5.2.6-GCCcore-8.2.0
Go 1.12
GObject-Introspection 1.60.1-GCCcore-8.2.0-Python-3.7.2
GObject-Introspection 1.58.3-GCCcore-8.2.0-Python-2.7.15
gompi 2019a
gompic 2019a
gperf 3.1-GCCcore-8.2.0
graphite2 1.3.14-GCCcore-8.2.0
gridGraphics 0.4-1-foss-2019a-R-3.6.0
GROMACS 2020.3-fosscuda-2019a
GROMACS 2019.2-fosscuda-2019a-PLUMED
GROMACS 2019.2-foss-2019a-PLUMED
GSL 2.5-GCC-8.2.0-2.31.1
GST-plugins-base 1.16.0-GCC-8.2.0-2.31.1
GStreamer 1.16.0-GCC-8.2.0-2.31.1
GTK+ 3.24.8-GCCcore-8.2.0
Guile 1.8.8-GCCcore-8.2.0
gzip 1.10-GCCcore-8.2.0
h5py 2.9.0-fosscuda-2019a
h5py 2.9.0-foss-2019a
h5py 2.10.0-fosscuda-2019a
h5py 2.10.0-foss-2019a
HarfBuzz 2.4.0-GCCcore-8.2.0
HDF 4.2.14-GCCcore-8.2.0
HDF5 1.10.5-iompi-2019a
HDF5 1.10.5-gompic-2019a
HDF5 1.10.5-gompi-2019a
hdf5storage 0.1.15-fosscuda-2019a
hdf5storage 0.1.15-foss-2019a
help2man 1.47.7-GCCcore-8.2.0
help2man 1.47.4
HERMESv3_GR 1.0.2-foss-2019a-Python-2.7.15
HISAT2 2.1.0-foss-2019a
HPL 2.3-iomkl-2019a
HPL 2.3-foss-2019a
HTSlib 1.9-GCC-8.2.0-2.31.1
HTSlib 1.9-foss-2019a
hwloc 1.11.11-GCCcore-8.2.0
hypothesis 4.23.4-GCCcore-8.2.0
Hypre 2.15.1-foss-2019a
ICA-AROMA 0.4.4-beta-foss-2019a-Python-3.7.2
icc 2019.1.144-GCC-8.2.0-2.31.1
iccifort 2019.1.144-GCC-8.2.0-2.31.1
ICU 64.2-GCCcore-8.2.0
ifort 2019.1.144-GCC-8.2.0-2.31.1
IGV 2.6.2-Java-11
iimpi 2019a
ilastik 1.3.2post1
ImageMagick 7.0.8-46-GCCcore-8.2.0
imkl 2019.1.144-iompi-2019a
imkl 2019.1.144-iimpi-2019a
impi 2019.7.217-iccifort-2019.1.144-GCC-8.2.0-2.31.1
impi 2018.4.274-iccifort-2019.1.144-GCC-8.2.0-2.31.1
intel 2019a
intervaltree 3.0.2-fosscuda-2019a-Python-3.7.2
intervaltree 3.0.2-foss-2019a-Python-3.7.2
intltool 0.51.0-GCCcore-8.2.0
ioapi 3.2-foss-2019a
iomkl 2019a
iompi 2019a
IPython 7.7.0-fosscuda-2019a-Python-3.7.2
IPython 7.7.0-foss-2019a-Python-3.7.2
JasPer 2.0.14-GCCcore-8.2.0
Java 1.8_191-b26-OpenJDK
Java 1.8.0_202
Java 1.8
Java 1.7.0_80
Java 11.0.2
Java 11
jbigkit 2.1-GCCcore-8.2.0
jemalloc 5.2.0-GCCcore-8.2.0
Judy 1.0.5-GCCcore-8.2.0
karyoploteR 1.10.5-foss-2019a-R-3.6.0
Keras 2.2.4-fosscuda-2019a-Python-3.7.2
Keras 2.2.4-foss-2019a-Python-3.7.2
LAME 3.100-GCCcore-8.2.0
LAMMPS stable_7Aug2019-fosscuda-2019a-Python-3.7.2
LAMMPS stable_7Aug2019-foss-2019a-Python-3.7.2
landscapemetrics 1.3-foss-2019a-R-3.6.0
landscapemetrics 1.2.1-foss-2019a-R-3.6.0
libaio 0.3.111-GCCcore-8.2.0
libcerf 1.11-GCCcore-8.2.0
libdap 3.20.4-GCCcore-8.2.0
libdrm 2.4.97-GCCcore-8.2.0-libpng-1.2.58
libdrm 2.4.97-GCCcore-8.2.0
libepoxy 1.5.3-GCCcore-8.2.0
libevent 2.1.8-GCCcore-8.2.0
libffi 3.2.1-GCCcore-8.2.0
libgcrypt 1.8.4-GCCcore-8.2.0
libgd 2.2.5-GCCcore-8.2.0
libgeotiff 1.5.1-GCCcore-8.2.0
libGLU 9.0.0-GCCcore-8.2.0
libgpg-error 1.38-GCCcore-8.2.0
libgpg-error 1.36-GCCcore-8.2.0
libgpuarray 0.7.6-fosscuda-2019a
libjpeg-turbo 2.0.2-GCCcore-8.2.0
libmatheval 1.1.11-GCCcore-8.2.0
libpciaccess 0.14-GCCcore-8.2.0
libpng 1.6.36-GCCcore-8.2.0
libpng 1.2.58-GCCcore-8.2.0
libpng 1.2.58
libpsl 0.21.0-GCCcore-8.2.0
libreadline 8.0-GCCcore-8.2.0
libsndfile 1.0.28-GCCcore-8.2.0
libsodium 1.0.17-GCCcore-8.2.0
LibSoup 2.66.1-GCCcore-8.2.0
libspatialindex 1.9.3-GCCcore-8.2.0
libStatGen fae4fca-foss-2019a
libtasn1 4.13-GCCcore-8.2.0
LibTIFF 4.0.10-GCCcore-8.2.0
libtirpc 1.1.4-GCCcore-8.2.0
libtool 2.4.6-GCCcore-8.2.0
libunistring 0.9.10-GCCcore-8.2.0
libunwind 1.3.1-GCCcore-8.2.0
LibUUID 1.0.3-GCCcore-8.2.0
libwebp 1.0.2-GCCcore-8.2.0
libxml2 2.9.8-GCCcore-8.2.0
libxslt 1.1.33-GCCcore-8.2.0
libyaml 0.2.2-GCCcore-8.2.0
LittleCMS 2.9-GCCcore-8.2.0
LLVM 7.0.1-GCCcore-8.2.0
LMDB 0.9.23-GCCcore-8.2.0
lobSTR 4.0.6-foss-2019a
Lua 5.3.5-GCCcore-8.2.0
lxml 4.3.3-GCCcore-8.2.0
lz4 1.9.1-GCCcore-8.2.0
LZO 2.10-GCCcore-8.2.0
M4 1.4.18-GCCcore-8.2.0
M4 1.4.18
M4 1.4.17
magma 2.5.4-fosscuda-2019a
magma 2.5.1-fosscuda-2019a
Mako 1.0.8-GCCcore-8.2.0
mappy 2.17-fosscuda-2019a-Python-3.7.2
mappy 2.17-foss-2019a-Python-3.7.2
marginPhase cdf139e-foss-2019a
MariaDB 10.3.14-foss-2019a
MariaDB-connector-c 2.3.7-GCCcore-8.2.0
MAST 1.10.0-foss-2019a-R-3.6.0
MATLAB 2019b
matplotlib 3.1.1-fosscuda-2019a-Python-3.7.2
matplotlib 3.1.1-foss-2019a-Python-3.7.2
matplotlib 3.0.3-fosscuda-2019a-Python-3.7.2
matplotlib 3.0.3-foss-2019a-Python-3.7.2
matplotlib 2.2.4-fosscuda-2019a-Python-2.7.15
matplotlib 2.2.4-foss-2019a-Python-2.7.15
MCR R2016a
memory-profiler 0.55.0-foss-2019a
Mesa 19.0.1-GCCcore-8.2.0-libpng-1.2.58-dri
Mesa 19.0.1-GCCcore-8.2.0
Meson 0.50.0-GCCcore-8.2.0-Python-3.7.2
META 1.7
METIS 5.1.0-GCCcore-8.2.0
Miniconda3 4.7.12.1
Miniconda3 4.6.14-ppc64le
Minimac3 2.0.1-foss-2019a
minimap2 2.13-foss-2019a
MMSplice 1.0.3-foss-2019a-Python-3.7.2
MNE-Python 0.19.1-foss-2019a-Python-3.7.2
motif 2.3.8-foss-2019a
MotionCor2 1.2.6-GCCcore-8.2.0
MoviePy 1.0.1-fosscuda-2019a-Python-3.7.2
MoviePy 1.0.1-foss-2019a-Python-3.7.2
MPFR 4.0.2-GCCcore-8.2.0
mpi4py 3.0.2-gompi-2019a-timed-pingpong
MuTect 1.1.7-Java-11
NAG 27-intel-2019a
NAG 27-GCC-8.2.0-2.31.1
nanopolish 0.11.2-foss-2019a
NASM 2.14.02-GCCcore-8.2.0
NbClust 3.0-foss-2019a-R-3.6.0
ncbi-vdb 2.9.6-foss-2019a
NCCL 2.4.7-gcccuda-2019a-ppc64le
NCCL 2.4.7-gcccuda-2019a
ncdf4 1.16.1-foss-2019a-R-3.6.0
NCO 4.8.1-foss-2019a
ncurses 6.1-GCCcore-8.2.0
ncurses 6.0
ncurses 5.9
ncview 2.1.7-foss-2019a
netCDF 4.6.2-gompic-2019a
netCDF 4.6.2-gompi-2019a
netcdf4-python 1.5.1.2-foss-2019a-Python-3.7.2
netcdf4-python 1.5.1.2-foss-2019a-Python-2.7.15
netCDF-C++4 4.3.0-foss-2019a
netCDF-Fortran 4.4.5-gompic-2019a
netCDF-Fortran 4.4.5-gompi-2019a
nettle 3.4.1-GCCcore-8.2.0
networkx 2.3-foss-2019a-Python-3.7.2
NGS 2.9.6-foss-2019a-Java-11
NiBabel 3.1.0-foss-2019a-Python-3.7.2
NiBabel 2.4.0-foss-2019a
Ninja 1.9.0-GCCcore-8.2.0
Nipype 1.5.1-foss-2019a-Python-3.7.2
Nipype 1.4.2-foss-2019a-Python-3.7.2
Nipype 1.1.3-foss-2019a-Python-3.7.2
NLopt 2.6.1-GCCcore-8.2.0
NLTK 3.4.5-foss-2019a-Python-3.7.2
NSPR 4.21-GCCcore-8.2.0
NSS 3.42.1-GCCcore-8.2.0
numactl 2.0.12-GCCcore-8.2.0
numba 0.43.1-foss-2019a
OpenBLAS 0.3.6-GCC-8.2.0-2.31.1
OpenFOAM (The OpenFOAM Foundation) 7-foss-2019a
OpenFOAM (The OpenFOAM Foundation) 5.0-foss-2019a
OpenFOAM (The OpenFOAM Foundation) 5.0-20180108-foss-2019a
OpenJPEG 2.3.1-GCCcore-8.2.0
OpenMPI 3.1.6-iccifort-2019.1.144-GCC-8.2.0-2.31.1
OpenMPI 3.1.6-gcccuda-2019a
OpenMPI 3.1.6-GCC-8.2.0-2.31.1
OpenPGM 5.2.122-GCCcore-8.2.0
OpenSSL 1.1.1b-GCCcore-8.2.0
OSU-Micro-Benchmarks 5.6.2-iompi-2019a
OSU-Micro-Benchmarks 5.6.2-gompi-2019a
Pango 1.43.0-GCCcore-8.2.0
ParaView 5.4.1-foss-2019a-mpi
ParMETIS 4.0.3-gompi-2019a
PCRE 8.43-GCCcore-8.2.0
PCRE2 10.33-GCCcore-8.2.0
Perl 5.28.1-GCCcore-8.2.0
PETSc 3.11.1-foss-2019a
picard 2.21.1-Java-11
Pillow 6.0.0-GCCcore-8.2.0
Pillow-SIMD 6.0.0-GCCcore-8.2.0
pixman 0.38.0-GCCcore-8.2.0
pkg-config 0.29.2-GCCcore-8.2.0
pkgconfig 1.5.1-GCCcore-8.2.0-python
PLINKSEQ 0.10-GCC-8.2.0-2.31.1
PLUMED 2.5.2-fosscuda-2019a
PLUMED 2.5.2-foss-2019a
PnetCDF 1.11.2-foss-2019a
poppler 0.90.1-GCCcore-8.2.0
PowerAI 1.6.1
powerveclib 1.0.6
profvis 0.3.6-foss-2019a-R-3.6.0
PROJ 6.0.0-GCCcore-8.2.0
protobuf 3.7.1-GCCcore-8.2.0
protobuf 3.6.1.2-GCCcore-8.2.0
psutil 5.6.3-GCCcore-8.2.0
ptemcee 1.0.0-foss-2019a
pybedtools 0.8.0-foss-2019a
pyblosc 1.8.1-fosscuda-2019a-Python-3.7.2
pyblosc 1.8.1-foss-2019a-Python-3.7.2
PyPy 3.6-v7.2.0-fosscuda-2019a
PyPy 3.6-v7.2.0-foss-2019a
PyPy 2.7-v7.2.0-fosscuda-2019a
PyPy 2.7-v7.2.0-foss-2019a
PyQt5 5.12.1-GCCcore-8.2.0-Python-3.7.2
Pysam 0.15.2-fosscuda-2019a
Pysam 0.15.2-foss-2019a
Python 3.7.2-GCCcore-8.2.0
Python 2.7.15-GCCcore-8.2.0
PyTorch 1.2.0-fosscuda-2019a-Python-3.7.2
PyTorch 1.2.0-foss-2019a-Python-3.7.2
PyYAML 5.1-GCCcore-8.2.0
QDNAseq 1.20.0-foss-2019a-R-3.6.0
qqman 0.1.4-foss-2019a-R-3.6.0
Qt5 5.12.3-GCCcore-8.2.0
R 3.6.0-foss-2019a
Racon 1.4.7-GCCcore-8.2.0-Python-3.7.2
Racon 1.4.7-fosscuda-2019a
R-bundle-Bioconductor 3.9-foss-2019a-R-3.6.0
re2c 1.1.1-GCCcore-8.2.0
RELION 3.0.8-fosscuda-2019a-ppc64le
RELION 3.0.8-fosscuda-2019a
RELION 3.0.8-foss-2019a-ppc64le
RELION 3.0.8-foss-2019a
rgdal 1.4-4-foss-2019a-R-3.6.0
rMATS 4.0.2-foss-2019a-Python-2.7.15
RNA_MUTECT 1.0-foss-2019a
rpy2 2.8.2-foss-2019a-Python-3.7.2
Ruby 2.6.3-GCCcore-8.2.0
Rust 1.35.0-GCCcore-8.2.0
SAIGE 0.35.8.8-foss-2019a-R-3.6.0
SAMtools 1.9-GCC-8.2.0-2.31.1
savvy 1.3.0-GCC-8.2.0-2.31.1
ScaLAPACK 2.0.2-gompic-2019a-OpenBLAS-0.3.6
ScaLAPACK 2.0.2-gompi-2019a-OpenBLAS-0.3.6
scikit-image 0.15.0-fosscuda-2019a-Python-3.7.2
scikit-image 0.15.0-foss-2019a-Python-3.7.2
scikit-learn 0.21.3-foss-2019a-Python-3.7.2
scikit-learn 0.20.3-fosscuda-2019a
scikit-learn 0.20.3-foss-2019a
scikit-multiflow 0.4.1-foss-2019a-Python-3.7.2
SciPy-bundle 2019.03-fosscuda-2019a
SciPy-bundle 2019.03-foss-2019a
SCons 3.0.5-GCCcore-8.2.0
SCOTCH 6.0.6-gompi-2019a
SDL2 2.0.9-GCCcore-8.2.0
Seaborn 0.9.0-foss-2019a-Python-3.7.2
Serf 1.3.9-GCCcore-8.2.0
Seurat 3.1.1-foss-2019a-R-3.6.0
shrinkwrap 1.0.0-beta-GCCcore-8.2.0
sklearn-crfsuite 0.3.6-fosscuda-2019a-Python-3.7.2
sklearn-crfsuite 0.3.6-foss-2019a-Python-3.7.2
slurm-drmaa 1.1.0-GCC-8.2.0-2.31.1
SMOKE 4.7-iomkl-2019a
SMOKE 4.7-intel-2019a
snappy 1.1.7-GCCcore-8.2.0
spacy 2.1.8-foss-2019a-Python-3.7.2
spant 0.19.0-foss-2019a-R-3.6.0
spant 0.18.0-foss-2019a-R-3.6.0
Spark 2.4.4-foss-2019a-Hadoop-2.7-Java-11-Python-3.7.2
SpliceAI 1.3-fosscuda-2019a-Python-3.7.2
SpliceAI 1.3-foss-2019a-Python-3.7.2
SPOT-RNA 770ab5c-fosscuda-2019a-Python-3.7.2
SPOT-RNA 770ab5c-foss-2019a-Python-3.7.2
SQLite 3.27.2-GCCcore-8.2.0
SRA-Toolkit 2.9.6-1-centos_linux64
Stampy 1.0.32-foss-2019a-Python-2.7.15
STAR 2.7.1a-GCC-8.2.0-2.31.1
Stata 16
statsmodels 0.10.1-fosscuda-2019a
statsmodels 0.10.1-foss-2019a
Subversion 1.12.0-GCCcore-8.2.0
SuiteSparse 5.4.0-foss-2019a-METIS-5.1.0
SuperLU 5.2.1-foss-2019a
SWIG 3.0.12-GCCcore-8.2.0-Python-3.7.2
SWIG 3.0.12-GCCcore-8.2.0-Python-2.7.15
Szip 2.1.1-GCCcore-8.2.0
tabix 0.2.6-GCCcore-8.2.0
talos 0.6.3-fosscuda-2019a-Python-3.7.2
talos 0.6.3-foss-2019a-Python-3.7.2
tbb 2019_U4-GCCcore-8.2.0
Tcl 8.6.9-GCCcore-8.2.0
tcsh 6.20.00-GCCcore-8.2.0
TensorFlow 1.14.0-fosscuda-2019a-Python-3.7.2
TensorFlow 1.14.0-foss-2019a-Python-3.7.2
TensorFlow 1.13.1-fosscuda-2019a-Python-3.7.2
TensorFlow 1.13.1-foss-2019a-Python-3.7.2
TensorFlow-Large-Model-Support 0.1.0-fosscuda-2019a-Python-3.7.2
TensorFlow-Large-Model-Support 0.1.0-foss-2019a-Python-3.7.2
texinfo 6.5-GCCcore-8.2.0
texlive 20200406-GCCcore-8.2.0
Theano 1.0.4-fosscuda-2019a
Theano 1.0.4-foss-2019a
Tk 8.6.9-GCCcore-8.2.0
Tkinter 3.7.2-GCCcore-8.2.0
Tkinter 2.7.15-GCCcore-8.2.0
tombo 1.5-foss-2019a-Python-3.7.2
torchvision 0.3.0-fosscuda-2019a-Python-3.7.2
torchvision 0.3.0-foss-2019a-Python-3.7.2
tqdm 4.33.0-GCCcore-8.2.0-Python-3.7.2
tqdm 4.33.0-foss-2019a-Python-3.7.2
Trimmomatic 0.38-Java-1.8
TwoSampleMR 0.4.25-foss-2019a-R-3.6.0
UCX 1.6.1-GCCcore-8.2.0
UDUNITS 2.2.26-GCCcore-8.2.0
utf8proc 2.3.0-GCCcore-8.2.0
util-linux 2.33-GCCcore-8.2.0
utm 0.5.0-foss-2019a-Python-3.7.2
utm 0.5.0-foss-2019a-Python-2.7.15
Valgrind 3.15.0-foss-2019a
veclib 77ad285-fosscuda-2019a
veclib 77ad285-foss-2019a
velocyto 0.17.17-foss-2019a-Python-3.7.2
VEP 96.0-foss-2019a-Perl-5.28.1
VTK 8.2.0-foss-2019a-Python-3.7.2
WebKitGTK+ 2.24.1-GCC-8.2.0-2.31.1
WGCNA 1.69-foss-2019a-R-3.6.0
WhatsHap 0.18-foss-2019a-Python-3.7.2
wxWidgets 3.0.4-GCC-8.2.0-2.31.1
X11 20190311-GCCcore-8.2.0-libpng-1.2.58
X11 20190311-GCCcore-8.2.0
x264 20190413-GCCcore-8.2.0
x265 3.0-GCCcore-8.2.0
xarray 0.13.0-foss-2019a-Python-3.7.2
xESMF 0.2.1-foss-2019a-Python-3.7.2
XML-LibXML 2.0200-GCCcore-8.2.0-Perl-5.28.1
xorg-macros 1.19.2-GCCcore-8.2.0
xprop 1.2.4-GCCcore-8.2.0
XZ 5.2.4-GCCcore-8.2.0
Yasm 1.3.0-GCCcore-8.2.0
YAXT 0.6.0-foss-2019a
ZeroMQ 4.3.2-GCCcore-8.2.0
zlib 1.2.11-GCCcore-8.2.0
zlib 1.2.11
zstd 1.4.0-GCCcore-8.2.0