SciPy-bundle 2019.03-foss-2019a

There is a newer version of SciPy-bundle

Bundle of Python packages for scientific software

Accessing SciPy-bundle 2019.03-foss-2019a

To load the module for SciPy-bundle 2019.03-foss-2019a please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):

module load SciPy-bundle/2019.03-foss-2019a

There is a GPU enabled version of this module: SciPy-bundle 2019.03-fosscuda-2019a

BEAR Apps Version




The listed architectures consist of two part: OS-CPU.

  • BlueBEAR: The OS used on BlueBEAR is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.
  • BEAR Cloud and CaStLeS VMs: These VMs can have one of two OSes. Those with access to a BEAR Cloud or CaStLeS VM should check that the listed architectures for an application include the OS of VM being used. The VMs, irrespective of OS, will use the haswell CPU type.


  • mpi4py 3.0.1
  • mpmath 1.1.0
  • numpy 1.16.2
  • pandas 0.24.2
  • scipy 1.2.1

More Information

For more information visit the SciPy-bundle website.


This version of SciPy-bundle has a direct dependency on: foss/2019a Python/2.7.15-GCCcore-8.2.0 Python/3.7.2-GCCcore-8.2.0

This version of SciPy-bundle is compatible with multiple vesions of Python. At any time, only one of the versions of Python can be active and the desired version of Python should be loaded before loading this version of SciPy-bundle.

Required By

This version of SciPy-bundle is a direct dependent of: ALFA/1.1.1-foss-2019a-Python-3.7.2 basemap/1.2.1-foss-2019a-Python-2.7.15 Biopython/1.73-foss-2019a bokeh/1.3.4-foss-2019a-Python-3.7.2 Bullet/2.88-foss-2019a-Python-3.7.2 Cartopy/0.17.0-foss-2019a-Python-3.7.2 cftime/ cftime/ corner/2.0.1-foss-2019a-Python-3.7.2 corner/2.0.1-foss-2019a-Python-2.7.15 dask/2.3.0-foss-2019a-Python-3.7.2 emcee/2.2.1-foss-2019a ESMPy/8.0.0-foss-2019a-Python-2.7.15 ESMPy/8.0.0-foss-2019a-Python-3.7.2 flappie/2.0.0-foss-2019a-Python-3.7.2 GDAL/3.0.0-foss-2019a-Python-2.7.15 GDAL/3.0.0-foss-2019a-Python-3.7.2 gensim/3.8.1-foss-2019a-Python-3.7.2 h5py/2.10.0-foss-2019a h5py/2.9.0-foss-2019a HERMESv3_GR/1.0.2-foss-2019a-Python-2.7.15 matplotlib/2.2.4-foss-2019a-Python-2.7.15 matplotlib/3.0.3-foss-2019a-Python-3.7.2 matplotlib/3.1.1-foss-2019a-Python-3.7.2 MoviePy/1.0.1-foss-2019a-Python-3.7.2 networkx/2.3-foss-2019a-Python-3.7.2 NiBabel/2.4.0-foss-2019a NiBabel/3.1.0-foss-2019a-Python-3.7.2 numba/0.43.1-foss-2019a ptemcee/1.0.0-foss-2019a pyblosc/1.8.1-foss-2019a-Python-3.7.2 PyTorch/1.2.0-foss-2019a-Python-3.7.2 rMATS/4.0.2-foss-2019a-Python-2.7.15 scikit-learn/0.21.3-foss-2019a-Python-3.7.2 scikit-learn/0.20.3-foss-2019a spacy/2.1.8-foss-2019a-Python-3.7.2 SPOT-RNA/770ab5c-foss-2019a-Python-3.7.2 statsmodels/0.10.1-foss-2019a talos/0.6.3-foss-2019a-Python-3.7.2 TensorFlow/1.14.0-foss-2019a-Python-3.7.2 TensorFlow/1.13.1-foss-2019a-Python-3.7.2 Theano/1.0.4-foss-2019a VTK/8.2.0-foss-2019a-Python-3.7.2 xarray/0.13.0-foss-2019a-Python-3.7.2 xESMF/0.2.1-foss-2019a-Python-3.7.2

Other Versions

These versions of SciPy-bundle are available on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 5th July 2019