tombo 1.5-foss-2019a-Python-3.7.2
There is a newer install of tombo
Tombo is a suite of tools primarily for the identification of modified nucleotides from raw nanopore sequencing data.Accessing tombo 1.5-foss-2019a-Python-3.7.2
To load the module for tombo 1.5-foss-2019a-Python-3.7.2 please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):
📋
module load tombo/1.5-foss-2019a-Python-3.7.2
BEAR Apps Version
Architectures
EL8-icelake — EL8-sapphirerapids
The listed architectures consist of two parts: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.
More Information
For more information visit the tombo website.
Dependencies
This version of tombo has a direct dependency on: foss/2019a h5py/2.10.0-foss-2019a mappy/2.17-foss-2019a-Python-3.7.2 Python/3.7.2-GCCcore-8.2.0 rpy2/2.8.2-foss-2019a-Python-3.7.2 tqdm/4.33.0-foss-2019a-Python-3.7.2
Other Versions
These versions of tombo are available on the BEAR systems (BlueBEAR and BEAR Cloud VMs). These will be retained in accordance with our Applications Support and Retention Policy.
| Version | BEAR Apps Version |
|---|---|
| 1.5.1-foss-2019b-Python-3.7.4 | 2019b |
| 7473afe-foss-2019b-Python-3.7.4-cowplot | 2019b |
Last modified on 16th August 2019