RNA_MUTECT 1.0-foss-2019a

RNA-MuTect pipeline

Accessing RNA_MUTECT 1.0-foss-2019a

To load the module for RNA_MUTECT 1.0-foss-2019a please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load RNA_MUTECT/1.0-foss-2019a

BEAR Apps Version

2019a

Architectures

EL8-cascadelake — EL8-icelake — EL8-sapphirerapids

The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

More Information

For more information visit the RNA_MUTECT website.

Dependencies

This version of RNA_MUTECT has a direct dependency on: BamTools/2.5.1-foss-2019a foss/2019a HISAT2/2.1.0-foss-2019a MCR/R2016a MuTect/1.1.7-Java-11 PLINKSEQ/0.10-GCC-8.2.0-2.31.1 SAMtools/1.9-GCC-8.2.0-2.31.1

Last modified on 1st August 2019