HISAT2 is a fast and sensitive alignment program for mapping next-generation sequencing reads (both DNA and RNA) against the general human population (as well as against a single reference genome).

More Information

For more information visit the HISAT2 website.

Available Versions

These versions of HISAT2 are available on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Version BEAR Apps Version
2.2.1-foss-2019b 2019b
2.1.0-foss-2019a 2019a