SpliceAI 1.3-foss-2019a-Python-3.7.2
A deep learning-based tool to identify splice variantsAccessing SpliceAI 1.3-foss-2019a-Python-3.7.2
To load the module for SpliceAI 1.3-foss-2019a-Python-3.7.2 please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):
📋
module load SpliceAI/1.3-foss-2019a-Python-3.7.2
BEAR Apps Version
Architectures
EL8-cascadelake — EL8-icelake — EL8-sapphirerapids
The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.
Extensions
- pyfaidx 0.5.5.2
- SpliceAI 1.3
More Information
For more information visit the SpliceAI website.
Dependencies
This version of SpliceAI has a direct dependency on: Biopython/1.73-foss-2019a foss/2019a Keras/2.2.4-foss-2019a-Python-3.7.2 Pysam/0.15.2-foss-2019a Python/3.7.2-GCCcore-8.2.0
Last modified on 16th December 2019