FastQC 0.11.9-Java-11

FastQC is a quality control application for high throughput sequence data. It reads in sequence data in a variety of formats and can either provide an interactive application to review the results of several different QC checks, or create an HTML based report which can be integrated into a pipeline.

Accessing FastQC 0.11.9-Java-11

To load the module for FastQC 0.11.9-Java-11 please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load FastQC/0.11.9-Java-11

BEAR Apps Version

2019b

Architectures

EL8-cascadelake — EL8-icelake — EL8-sapphirerapids

The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

More Information

For more information visit the FastQC website.

Dependencies

This version of FastQC has a direct dependency on: Java/11

Required By

This version of FastQC is a direct dependent of: KneadData/0.7.6-foss-2019b-Python-3.7.4-Java-11 Trim_Galore/0.6.5-GCCcore-8.3.0-Java-11-Python-3.7.4

Last modified on 10th June 2020