MetaXcan 0.7.3-foss-2019b-Python-3.7.4

MetaXcan is a set of tools to integrate genomic information of biological mechanisms with complex traits.

Accessing MetaXcan 0.7.3-foss-2019b-Python-3.7.4

To load the module for MetaXcan 0.7.3-foss-2019b-Python-3.7.4 please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load MetaXcan/0.7.3-foss-2019b-Python-3.7.4

BEAR Apps Version

2019b

Architectures

EL8-icelake — EL8-sapphirerapids

The listed architectures consist of two parts: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

Extensions

• bgen-reader-3.0.7
• cachetools 4.1.1
• coloredlogs 14.0
• cyvcf2 0.20.9
• h5py-cache-1.0
• humanfriendly 8.2
• MetaXcan 0.7.3
• pytest-runner-5.2
• scipy 1.2.3
• texttable 1.6.3

More Information

For more information visit the MetaXcan website.

Dependencies

This version of MetaXcan has a direct dependency on: cURL/7.66.0-GCCcore-8.3.0 dask/2.8.0-foss-2019b-Python-3.7.4 foss/2019b h5py/2.10.0-foss-2019b-Python-3.7.4 limix-bgen/3.0.3-GCCcore-8.3.0 Python/3.7.4-GCCcore-8.3.0 SciPy-bundle/2019.10-foss-2019b-Python-3.7.4 statsmodels/0.11.0-foss-2019b-Python-3.7.4 tqdm/4.41.1-GCCcore-8.3.0 xarray/0.15.1-foss-2019b-Python-3.7.4

Last modified on 30th October 2020