h5py 2.10.0-foss-2019b-Python-3.7.4

There is a newer version of h5py

HDF5 for Python (h5py) is a general-purpose Python interface to the Hierarchical Data Format library, version 5. HDF5 is a versatile, mature scientific software library designed for the fast, flexible storage of enormous amounts of data.

Accessing h5py 2.10.0-foss-2019b-Python-3.7.4

To load the module for h5py 2.10.0-foss-2019b-Python-3.7.4 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load h5py/2.10.0-foss-2019b-Python-3.7.4

There is a GPU enabled version of this module: h5py 2.10.0-fosscuda-2019b-Python-3.7.4

BEAR Apps Version

2019b

Architectures

EL8-cascadelake — EL8-haswell — Ubuntu20.04-haswell

The listed architectures consist of two part: OS-CPU.

  • BlueBEAR: The OS used on BlueBEAR is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.
  • BEAR and CaStLeS Cloud VMs: These VMs can have one of two OSes. Those with access to a BEAR Cloud or CaStLeS VM should check that the listed architectures for an application include the OS of VM being used. The VMs, irrespective of OS, will use the haswell CPU type.

More Information

For more information visit the h5py website.

Dependencies

This version of h5py has a direct dependency on: foss/2019b HDF5/1.10.5-gompi-2019b Python/3.7.4-GCCcore-8.3.0 SciPy-bundle/2019.10-foss-2019b-Python-3.7.4

Required By

This version of h5py is a direct dependent of: biom-format/2.1.8-foss-2019b-Python-3.7.4 hdf5storage/0.1.15-foss-2019b-Python-3.7.4 Keras/2.3.1-foss-2019b-Python-3.7.4 Keras/2.3.1-foss-2019b-TensorFlow-1.15.0-Python-3.7.4 LongQC/1.0-foss-2019b-Python-3.7.4 MetaXcan/0.7.3-foss-2019b-Python-3.7.4 MNE-Python/0.20.4-foss-2019b-Python-3.7.4 neuropythy/0.11.8-foss-2019b-Python-3.7.4-Java-11 OpenMC/0.12.0-foss-2019b-Python-3.7.4 OpenMC/0.11.0-foss-2019b-Python-3.7.4 pycoQC/2.5.0.21-foss-2019b-Python-3.7.4 PyMC3/3.8-foss-2019b-Python-3.7.4 PyTorch-Geometric/1.4.3-foss-2019b-Python-3.7.4-PyTorch-1.4.0 refnx/0.1.17-foss-2019b-Python-3.7.4 scVelo/0.1.25-foss-2019b-Python-3.7.4 scVelo/0.1.24-foss-2019b-Python-3.7.4 TensorFlow/2.0.0-foss-2019b-Python-3.7.4 TensorFlow/2.2.0-foss-2019b-Python-3.7.4 TensorFlow/1.15.0-foss-2019b-Python-3.7.4 tombo/1.5.1-foss-2019b-Python-3.7.4 tombo/7473afe-foss-2019b-Python-3.7.4-cowplot yaff/1.6.0-foss-2019b-Python-3.7.4

Other Versions

These versions of h5py are available on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 25th November 2019