HDF5 1.10.5-gompi-2019b

There is a newer version of HDF5

HDF5 is a unique technology suite that makes possible the management of extremely large and complex data collections.

Accessing HDF5 1.10.5-gompi-2019b

To load the module for HDF5 1.10.5-gompi-2019b please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):

module load HDF5/1.10.5-gompi-2019b

There is a GPU enabled version of this module: HDF5 1.10.5-gompic-2019b

BEAR Apps Version

2019b

Architectures

EL8-cascadelake — EL8-haswell — Ubuntu20.04-haswell

The listed architectures consist of two part: OS-CPU.

  • BlueBEAR: The OS used on BlueBEAR is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.
  • BEAR Cloud and CaStLeS VMs: These VMs can have one of two OSes. Those with access to a BEAR Cloud or CaStLeS VM should check that the listed architectures for an application include the OS of VM being used. The VMs, irrespective of OS, will use the haswell CPU type.

More Information

For more information visit the HDF5 website.

Dependencies

This version of HDF5 has a direct dependency on: gompi/2019b Szip/2.1.1-GCCcore-8.3.0 zlib/1.2.11-GCCcore-8.3.0

Required By

This version of HDF5 is a direct dependent of: Dynare/4.6.3-foss-2019b h5py/2.10.0-foss-2019b-Python-3.7.4 h5py/2.10.0-foss-2019b-Python-2.7.16 ITK/5.0.1-foss-2019b-Python-3.7.4 kallisto/0.46.1-foss-2019b LAMMPS/3Mar2020-foss-2019b-Python-3.7.4-kokkos NanoMod/0.2.2-foss-2019b-Python-2.7.16 ncbi-vdb/2.10.4-gompi-2019b netCDF/4.7.1-gompi-2019b OpenMC/0.11.0-foss-2019b-Python-3.7.4 OpenMC/0.12.0-foss-2019b-Python-3.7.4 ParaView/5.6.2-foss-2019b-Python-3.7.4-mpi Peridigm/cb9979d-foss-2019b-Python-3.7.4 PyTables/3.6.1-foss-2019b-Python-3.7.4 QuantumESPRESSO/6.6-foss-2019b R/3.6.2-foss-2019b R-bundle-Bioconductor/3.10-foss-2019b-R-3.6.2 Trilinos/12.12.1-foss-2019b-Python-3.7.4 variant_tools/3.1.3-foss-2019b-Python-3.7.4 VOTCA/1.5.1-foss-2019b VTK/8.2.0-foss-2019b-Python-3.7.4

Other Versions

These versions of HDF5 are available on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 25th November 2019