dropEst 0.8.6-foss-2019b-R-3.6.2

Pipeline for initial analysis of droplet-based single-cell RNA-seq data

Accessing dropEst 0.8.6-foss-2019b-R-3.6.2

To load the module for dropEst 0.8.6-foss-2019b-R-3.6.2 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load dropEst/0.8.6-foss-2019b-R-3.6.2

BEAR Apps Version




The listed architectures consist of two part: OS-CPU.

  • BlueBEAR: The OS used on BlueBEAR is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.
  • BEAR and CaStLeS Cloud VMs: These VMs can have one of two OSes. Those with access to a BEAR Cloud or CaStLeS VM should check that the listed architectures for an application include the OS of VM being used. The VMs, irrespective of OS, will use the haswell CPU type.

More Information

For more information visit the dropEst website.


This version of dropEst has a direct dependency on: BamTools/2.5.1-GCC-8.3.0 Boost/1.71.0-gompi-2019b foss/2019b R/3.6.2-foss-2019b zlib/1.2.11-GCCcore-8.3.0

Required By

This version of dropEst is a direct dependent of: BEAR-R-bio/2019b-foss-2019b-R-3.6.2

Last modified on 7th February 2020