BEAR-R-bio 2019b-foss-2019b-R-3.6.2

There is a newer version of BEAR-R-bio

This module provides access to several R bio libraries. It is primarily available for use with RStudio in the BlueBEAR Portal.

Accessing BEAR-R-bio 2019b-foss-2019b-R-3.6.2

To load the module for BEAR-R-bio 2019b-foss-2019b-R-3.6.2 please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):

module load BEAR-R-bio/2019b-foss-2019b-R-3.6.2

BEAR Apps Version

2019b

Architectures

EL8-cascadelake

The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

Dependencies

This version of BEAR-R-bio has a direct dependency on: AUCell/1.8.0-foss-2019b-R-3.6.2 cellassign/520de59-foss-2019b-Python-3.7.4-R-3.6.2 dropEst/0.8.6-foss-2019b-R-3.6.2 FD/1.0-12-foss-2019b-R-3.6.2 foss/2019b Kendall/2.2-foss-2019b-R-3.6.2 Monocle3/0.2.1-foss-2019b-R-3.6.2 phenoptrReports/0.2.6-foss-2019b-R-3.6.2 R/3.6.2-foss-2019b R-bundle-Bioconductor/3.10-foss-2019b-R-3.6.2 R-keras/2.2.5.0-foss-2019b-Python-3.7.4-R-3.6.2 rts/1.0-49-foss-2019b-R-3.6.2 Signac/1.0.0-foss-2019b-R-3.6.2 SingleR/1.0.6-foss-2019b-R-3.6.2 spant/1.4.0-foss-2019b-R-3.6.2 Taxonstand/2.2-foss-2019b-R-3.6.2 trend/1.1.4-foss-2019b-R-3.6.2 ukbtools/0.11.3-foss-2019b-R-3.6.2

Other Versions

These versions of BEAR-R-bio are available on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 6th May 2020