DECODE 0.10.0-fosscuda-2020b

DECODE is a Python and Pytorch based deep learning tool for single molecule localization microscopy (SMLM).

Accessing DECODE 0.10.0-fosscuda-2020b

To load the module for DECODE 0.10.0-fosscuda-2020b please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load DECODE/0.10.0-fosscuda-2020b

BEAR Apps Version



EL8-icelake (GPUs: NVIDIA A100, NVIDIA A30)

The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.


  • DECODE 0.10.0
  • Deprecated 1.2.13
  • importlib_resources 5.4.0
  • seaborn 0.10.0
  • Spline 0.10.0

More Information

For more information visit the DECODE website.


This version of DECODE has a direct dependency on: fosscuda/2020b GitPython/3.1.14-GCCcore-10.2.0 h5py/3.1.0-fosscuda-2020b matplotlib/3.3.3-fosscuda-2020b pybind11/2.6.0-GCCcore-10.2.0 Python/3.8.6-GCCcore-10.2.0 PyTorch/1.7.1-fosscuda-2020b scikit-image/0.18.1-fosscuda-2020b scikit-learn/0.23.2-fosscuda-2020b SciPy-bundle/2020.11-fosscuda-2020b TensorFlow/2.4.1-fosscuda-2020b tqdm/4.56.2-GCCcore-10.2.0

Last modified on 1st April 2022