Python 3.8.6-GCCcore-10.2.0

There is a newer version of Python

Python is a programming language that lets you work more quickly and integrate your systems more effectively.

Accessing Python 3.8.6-GCCcore-10.2.0

To load the module for Python 3.8.6-GCCcore-10.2.0 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load Python/3.8.6-GCCcore-10.2.0

BEAR Apps Version

2020b

Architectures

EL8-cascadelakeEL8-haswellUbuntu20.04-haswell

The listed architectures consist of two part: OS-CPU.

  • BlueBEAR: The OS used on BlueBEAR is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.
  • BEAR and CaStLeS Cloud VMs: These VMs can have one of two OSes. Those with access to a BEAR Cloud or CaStLeS VM should check that the listed architectures for an application include the OS of VM being used. The VMs, irrespective of OS, will use the haswell CPU type.

Extensions

  • alabaster 0.7.12
  • appdirs 1.4.4
  • asn1crypto 1.4.0
  • atomicwrites 1.4.0
  • attrs 20.2.0
  • Babel 2.8.0
  • bcrypt 3.2.0
  • bitstring 3.1.7
  • blist 1.3.6
  • CacheControl 0.12.6
  • cachy 0.3.0
  • certifi 2020.6.20
  • cffi 1.14.3
  • chardet 3.0.4
  • cleo 0.8.1
  • click 7.1.2
  • clikit 0.6.2
  • colorama 0.4.3
  • crashtest 0.3.1
  • cryptography 3.1.1
  • Cython 0.29.21
  • decorator 4.4.2
  • distlib 0.3.1
  • docopt 0.6.2
  • docutils 0.16
  • ecdsa 0.16.0
  • filelock 3.0.12
  • flit 3.0.0
  • flit-core-3.0.0
  • fsspec 0.8.4
  • future 0.18.2
  • html5lib 1.1
  • idna 2.10
  • imagesize 1.2.0
  • importlib_metadata 2.0.0
  • iniconfig 1.0.1
  • intervaltree 3.1.0
  • intreehooks 1.0
  • ipaddress 1.0.23
  • jeepney 0.4.3
  • Jinja2 2.11.2
  • joblib 0.17.0
  • jsonschema 3.2.0
  • keyring 21.4.0
  • keyrings.alt 4.0.0
  • liac-arff-2.5.0
  • lockfile 0.12.2
  • MarkupSafe 1.1.1
  • mock 4.0.2
  • more-itertools-8.5.0
  • msgpack 1.0.0
  • netaddr 0.8.0
  • netifaces 0.10.9
  • nose 1.3.7
  • packaging 20.4
  • paramiko 2.7.2
  • pastel 0.2.1
  • pathlib2 2.3.5
  • paycheck 1.0.2
  • pbr 5.5.0
  • pexpect 4.8.0
  • pip 20.2.3
  • pkginfo 1.5.0.1
  • pluggy 0.13.1
  • poetry 1.1.3
  • poetry-core-1.0.0
  • psutil 5.7.2
  • ptyprocess 0.6.0
  • py 1.9.0
  • py_expression_eval 0.3.10
  • pyasn1 0.4.8
  • pycparser 2.20
  • pycrypto 2.6.1
  • Pygments 2.7.1
  • pylev 1.3.0
  • PyNaCl 1.4.0
  • pyparsing 2.4.7
  • pyrsistent 0.17.3
  • pytest 6.1.1
  • python-dateutil-2.8.1
  • pytoml 0.1.21
  • pytz 2020.1
  • regex 2020.10.11
  • requests 2.24.0
  • requests-toolbelt-0.9.1
  • scandir 1.10.0
  • SecretStorage 3.1.2
  • setuptools 50.3.0
  • setuptools_scm 4.1.2
  • shellingham 1.3.2
  • simplegeneric 0.8.1
  • simplejson 3.17.2
  • six 1.15.0
  • snowballstemmer 2.0.0
  • sortedcontainers 2.2.2
  • Sphinx 3.2.1
  • sphinx-bootstrap-theme-0.7.1
  • sphinxcontrib-applehelp-1.0.2
  • sphinxcontrib-devhelp-1.0.2
  • sphinxcontrib-htmlhelp-1.0.3
  • sphinxcontrib-jsmath-1.0.1
  • sphinxcontrib-qthelp-1.0.3
  • sphinxcontrib-serializinghtml-1.1.4
  • sphinxcontrib-websupport-1.2.4
  • tabulate 0.8.7
  • threadpoolctl 2.1.0
  • toml 0.10.1
  • tomlkit 0.7.0
  • ujson 4.0.1
  • urllib3 1.25.10
  • virtualenv 20.0.34
  • wcwidth 0.2.5
  • webencodings 0.5.1
  • wheel 0.35.1
  • xlrd 1.2.0
  • zipp 3.3.0

More Information

For more information visit the Python website.

Dependencies

This version of Python has a direct dependency on: binutils/2.35-GCCcore-10.2.0 bzip2/1.0.8-GCCcore-10.2.0 GCCcore/10.2.0 GMP/6.2.0-GCCcore-10.2.0 libffi/3.3-GCCcore-10.2.0 libreadline/8.0-GCCcore-10.2.0 ncurses/6.2-GCCcore-10.2.0 SQLite/3.33.0-GCCcore-10.2.0 XZ/5.2.5-GCCcore-10.2.0 zlib/1.2.11-GCCcore-10.2.0

Required By

This version of Python is a direct dependent of: archspec/0.1.0-GCCcore-10.2.0 Arrow/0.17.1-fosscuda-2020b Arrow/0.17.1-foss-2020b astropy/4.2.1-foss-2020b basemap/1.2.2-foss-2020b BeautifulSoup/4.9.3-GCCcore-10.2.0 Biopython/1.78-foss-2020b bokeh/2.3.1-fosscuda-2020b bokeh/2.3.1-foss-2020b bwa-mem2-meth/0.2.2-GCC-10.2.0 Cartopy/0.18.0-foss-2020b cell2location/0.05-alpha-fosscuda-2020b cell2location/0.05-alpha-foss-2020b Cellpose/0.6.5-fosscuda-2020b Cellpose/0.6.5-foss-2020b Compass/20220402-foss-2020b cpl/7.1.4-foss-2020b CPLEX/20.10-GCCcore-10.2.0 cryoDRGN/0.3.5-foss-2020b cryoDRGN/0.3.5-fosscuda-2020b dask/2021.4.0-fosscuda-2020b dask/2021.4.0-foss-2020b DECODE/20220120-fosscuda-2020b DECODE/0.10.0-fosscuda-2020b dill/0.3.3-GCCcore-10.2.0 eccodes-python/1.1.0-foss-2020b emcee/3.0.2-foss-2020b ESMPy/8.0.1-foss-2020b esoreflex/2.11.5-foss-2020b espdr/2.3.3-foss-2020b Fiona/1.8.19-foss-2020b flatbuffers-python/1.12-GCCcore-10.2.0 GATK/4.2.0.0-GCCcore-10.2.0-Java-1.8 GATK/4.2.0.0-GCCcore-10.2.0-Java-11 GCPy/1.0.3-foss-2020b GDAL/3.2.1-foss-2020b gensim/3.8.3-foss-2020b geopandas/0.9.0-foss-2020b GeoRinex/1.16.1-foss-2020b geoviews/1.9.1-foss-2020b GitPython/3.1.14-GCCcore-10.2.0 GObject-Introspection/1.66.1-GCCcore-10.2.0 Graphviz/2.47.0-GCCcore-10.2.0-Java-11 GROMACS/2021.2-fosscuda-2020b GROMACS/2021.2-foss-2020b h5py/3.1.0-foss-2020b h5py/2.10.0-fosscuda-2020b h5py/3.1.0-fosscuda-2020b h5py/2.10.0-foss-2020b Hatanaka/2.8.0-foss-2020b holoviews/1.14.3-foss-2020b Horovod/0.21.1-fosscuda-2020b-PyTorch-1.7.1 Horovod/0.21.1-fosscuda-2020b-TensorFlow-2.4.1 hyperopt/0.2.5-fosscuda-2020b hyperopt/0.2.5-foss-2020b hypothesis/5.41.2-GCCcore-10.2.0 hypothesis/5.41.5-GCCcore-10.2.0 imageio/2.9.0-fosscuda-2020b IOHexperimenter/0.2.9.2-foss-2020b ipdb/0.13.9-GCCcore-10.2.0 IPython/7.18.1-GCCcore-10.2.0 IRkernel/1.2-foss-2020b-R-4.0.3 iterative-Random-Forest/0.2.5-foss-2020b JupyterLab/2.2.8-GCCcore-10.2.0 Keras/2.4.3-fosscuda-2020b LAMMPS/29Oct2020-foss-2020b-kokkos LAMMPS/29Oct2020-fosscuda-2020b-kokkos leidenalg/0.8.3-fosscuda-2020b leidenalg/0.8.3-foss-2020b libgpuarray/0.7.6-fosscuda-2020b lifelines/0.26.3-fosscuda-2020b lxml/4.6.3-GCCcore-10.2.0 Mako/1.1.3-GCCcore-10.2.0 matplotlib/3.3.3-foss-2020b matplotlib/3.3.3-fosscuda-2020b mechanize/0.4.7-GCCcore-10.2.0 Mercurial/5.7.1-GCCcore-10.2.0 Meson/0.55.3-GCCcore-10.2.0 MOFA2/1.0.1-foss-2020b-R-4.0.3 mofapy2/0.5.7-foss-2020b molmod/1.4.5-foss-2020b molmod/1.4.5-fosscuda-2020b mxfold2/0.1.1-foss-2020b-PyTorch-1.7.1 netcdf4-python/1.5.5.1-fosscuda-2020b netcdf4-python/1.5.5.1-foss-2020b networkx/2.5-fosscuda-2020b networkx/2.5-foss-2020b nevergrad/0.4.3.post4-foss-2020b numba/0.53.1-fosscuda-2020b numba/0.52.0-fosscuda-2020b numba/0.52.0-foss-2020b numba/0.53.1-foss-2020b OpenCV/4.5.1-fosscuda-2020b-contrib OpenCV/4.5.1-foss-2020b-contrib OpenMC/0.12.1-foss-2020b pathos/0.2.7-foss-2020b Pillow/8.0.1-GCCcore-10.2.0 Pillow-SIMD/7.1.2-GCCcore-10.2.0 pkgconfig/1.5.1-GCCcore-10.2.0-python plotly.py/4.14.3-GCCcore-10.2.0 PLUMED/2.6.2-foss-2020b PLUMED/2.6.2-iomkl-2020b PLUMED/2.6.2-fosscuda-2020b protobuf-python/3.14.0-GCCcore-10.2.0 pybind11/2.6.0-GCCcore-10.2.0 PyCairo/1.20.0-GCCcore-10.2.0 pyfits/3.5-foss-2020b pymap3d/2.7.2-foss-2020b PyMC3/3.11.1-fosscuda-2020b PyMC3/3.11.1-foss-2020b pyproj/3.0.1-foss-2020b PyQt5/5.15.1-GCCcore-10.2.0 pyro-api/0.1.2-fosscuda-2020b pyro-api/0.1.2-foss-2020b pyro-ppl/1.5.2-fosscuda-2020b pyro-ppl/1.5.2-foss-2020b PyTables/3.6.1-fosscuda-2020b PyTables/3.6.1-foss-2020b python-cdo/1.5.6-foss-2020b python-igraph/0.9.0-foss-2020b python-igraph/0.9.0-fosscuda-2020b PyTorch/1.7.1-foss-2020b PyTorch/1.7.1-fosscuda-2020b PyTorch3D/0.4.0-fosscuda-2020b-PyTorch-1.7.1 PyTorch3D/0.5.0-fosscuda-2020b-PyTorch-1.7.1 PyYAML/5.3.1-GCCcore-10.2.0 PyZMQ/22.1.0-GCCcore-10.2.0 scikit-build/0.11.1-foss-2020b scikit-build/0.11.1-fosscuda-2020b scikit-image/0.18.1-fosscuda-2020b scikit-learn/0.23.2-foss-2020b scikit-learn/0.23.2-fosscuda-2020b SciPy-bundle/2020.11-foss-2020b SciPy-bundle/2020.11-fosscuda-2020b SciPy-bundle/2020.11-iomkl-2020b Seaborn/0.11.1-foss-2020b Seaborn/0.11.1-fosscuda-2020b sf/1.0-0-foss-2020b-R-4.0.3 Shapely/1.7.1-GCC-10.2.0 Spark/3.1.1-fosscuda-2020b Spark/3.1.1-foss-2020b statsmodels/0.12.1-foss-2020b statsmodels/0.12.1-fosscuda-2020b tensorboardX/2.4-fosscuda-2020b-PyTorch-1.7.1 tensorboardX/2.4-foss-2020b-PyTorch-1.7.1 TensorFlow/2.4.1-fosscuda-2020b Theano/1.1.2-fosscuda-2020b-PyMC Theano/1.1.2-foss-2020b-PyMC Tkinter/3.8.6-GCCcore-10.2.0 Topaz/0.2.4-fosscuda-2020b-PyTorch-1.7.1 Topaz/0.2.4-foss-2020b-PyTorch-1.7.1 torchvision/0.8.2-foss-2020b-PyTorch-1.7.1 torchvision/0.8.2-fosscuda-2020b-PyTorch-1.7.1 tqdm/4.56.2-GCCcore-10.2.0 TumorDecon/1.1.1-foss-2020b typing-extensions/3.7.4.3-GCCcore-10.2.0 umap-learn/0.4.6-foss-2020b umap-learn/0.4.6-fosscuda-2020b uncertainties/3.1.5-foss-2020b vasprun-xml/1.0.4-foss-2020b visdom/0.1.8.9-fosscuda-2020b visdom/0.1.8.9-foss-2020b VTK/9.0.1-fosscuda-2020b VTK/9.0.1-foss-2020b wxPython/4.1.1-foss-2020b xarray/0.16.2-foss-2020b xarray/0.16.2-fosscuda-2020b xESMF/0.3.0-foss-2020b yaff/1.6.0-foss-2020b yaff/1.6.0-fosscuda-2020b

Other Versions

These versions of Python are available on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 22nd February 2021