Signac 1.2.1-foss-2020b-R-4.0.3-Seurat-af2925c

There is a newer install of Signac

A framework for the analysis and exploration of single-cell chromatin data. The 'Signac' package contains functions for quantifying single-cell chromatin data, computing per-cell quality control metrics, dimension reduction and normalization, visualization, and DNA sequence motif analysis.

Accessing Signac 1.2.1-foss-2020b-R-4.0.3-Seurat-af2925c

To load the module for Signac 1.2.1-foss-2020b-R-4.0.3-Seurat-af2925c please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load Signac/1.2.1-foss-2020b-R-4.0.3-Seurat-af2925c

BEAR Apps Version

2020b

Architectures

EL8-cascadelake — EL8-icelake — EL8-sapphirerapids

The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

Extensions

docopt 0.7.1
ggseqlogo 0.1
lsa 0.73.2
qlcMatrix 0.9.7
Signac 1.2.1
sparsesvd 0.2

More Information

For more information visit the Signac website.

Dependencies

This version of Signac has a direct dependency on: foss/2020b R/4.0.3-foss-2020b R-bundle-Bioconductor/3.12-foss-2020b-R-4.0.3 Seurat/af2925c-foss-2020b-R-4.0.3

Other Versions

These versions of Signac are available on the BEAR systems (BlueBEAR and BEAR Cloud VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Version	BEAR Apps Version
1.3.0-foss-2020b-R-4.0.3	2020b
1.0.0-foss-2019b-R-3.6.2	2019b
0.2.5-foss-2019b-R-3.6.2	2019b

Last modified on 28th May 2021