MotionCor2 1.4.7-GCCcore-10.3.0-CUDA-11.3.1

MotionCor2 correct anisotropic image motion at the single pixel level across the whole frame, suitable for both single particle and tomographic images. Iterative, patch-based motion detection is combined with spatial and temporal constraints and dose weighting. Cite publication: Shawn Q. Zheng, Eugene Palovcak, Jean-Paul Armache, Yifan Cheng and David A. Agard (2016) Anisotropic Correction of Beam-induced Motion for Improved Single-particle Electron Cryo-microscopy, Nature Methods, submitted. BioArxiv: https://biorxiv.org/content/early/2016/07/04/061960

Accessing MotionCor2 1.4.7-GCCcore-10.3.0-CUDA-11.3.1

To load the module for MotionCor2 1.4.7-GCCcore-10.3.0-CUDA-11.3.1 please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load MotionCor2/1.4.7-GCCcore-10.3.0-CUDA-11.3.1

BEAR Apps Version

2021a

Architectures

EL8-icelake — EL8-sapphirerapids

The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

More Information

For more information visit the MotionCor2 website.

Dependencies

This version of MotionCor2 has a direct dependency on: CUDA/11.3.1 GCCcore/10.3.0 libjpeg-turbo/2.0.6-GCCcore-10.3.0 LibTIFF/4.2.0-GCCcore-10.3.0 zlib/1.2.11-GCCcore-10.3.0

Required By

This version of MotionCor2 is a direct dependent of: RELION/4.0.0-foss-2021a-CUDA-11.3.1 RELION/3.1.3-foss-2021a-CUDA-11.3.1 Scipion/3.0.12-foss-2021a-CUDA-11.3.1 Scipion/3.1.0-foss-2021a-CUDA-11.3.1

Last modified on 17th June 2022